ZOOM Lite for Windows
- Downloads:
- Views:
- Rating:

ZOOM Lite is a next generation sequencing data mapping and visualization software. Users input reference genomes and Illumina short reads files or AB SOLiD color space reads files in various formats, such as *.fasta, *.fastq, *_seq.txt, *.csfasta etc. The output generated is the mapping results of these short reads on the reference sequence. ZOOM Lite has a fast and accurate mapping kernel based on a newly designed multiple spaced seeds theory.
* Both single-end and paired-end reads of various lengths from 15bp to 240bp can be handled.
* Any number of mismatches and one insertion/deletion of various lengths between the read and its target region on the reference sequence are allowed.
* Uniquely mapped results or best (top N) results for each read will be reported according to the minimal mismatches and indel length.
* Quality scores are utilized to enhance mapping accuracy.
* Based on the mapping kernel, ZOOM Lite allows users to load local read data and reference sequence data, select proper parameters, process high volume data in parallel among up to four CPUs, monitor the running tasks, store the mapping results, view the graphs of mapping results and output mapping results in either *.BED or *.GFF file formats for further surveying with the UCSC browser track information.
* Mapping results can be viewed in any desired scale, from the read depth graph over an entire chromosome to detailed sequence alignments between reads and the reference sequence. Users easily navigate to regions of interest simply via click and drag or scrolling.
Features:
· Supports single-end and paired-end reads
· Allows any number of mismatches and one insertion/deletion of various lengths
· Displays uniquely mapped results
· Based on the mapping kernel
· You can change the scale of the mapping results
Free download from Shareware Connection - A sequencing data mapping and visualization software
Version: 1.5.20100518 | Size: 42803 KB | Platform: WinOther
Released Date: 15-11-2012 | Rating: 0 | Title: ZOOM Lite for Windows
Author Url: http://www.bioinfor.com/
Program Info Url: http://www.bioinfor.com/
Download Url: http://www.bioinfor.com/software/ZOOMlite1.5.exe
Screenshot Url: http://i.i.com.com/cnwk.1d/i/tim//2010/01/27/73513286ad4a0a0f8beb7f19a7b701a3168a_1snapshot_540x405.JPG
PEAKS Studio 5.3 B20110719 - Designed for the researcher interested in highly confident results
Import Points for AutoCAD
Ez-Architect
ABViewer
My Hatch
DipTrace
Home Plan Pro
DipTrace Free
Import Shapes (ESRI)
JustCad
Raster Manager
Cartoon Maker
ThumbNail Viewer
Capture Perfect
Virtual Fashion Professional
Animation
Audio Encoders & Decoders
Audio File Players
Audio File Recorders
Audio
Authoring Tools
CD & DVD Tools
Composition
Desktop Publishing
Fonts
Graphic Capture
Graphic Viewers
Illustration
Image Editing
Opengl Data Visualization Software
Scientific Data Visualization Software
Excel Data Visualization Software
Mac Data Mapping Software
Data Flow Mapping Software
Zeus for Windows Lite - Zeus for Windows Lite is a handy text editor that can be used for creating text documents.
StockMap Lite for Windows 8 - StockMap Lite is a useful application for the Windows 8 users who want to receive updated information from the stock market.
Numerical Lite for Windows 8 - Numerical Lite is a collection of tools for the Windows 8 users who want to perform unit conversions and calculations from the Start screen.
Helium Community Edition for Windows 8 - Helium Community Edition for Windows 8 is a handy and reliable application designed to retrieve and analyze chemistry data.
Word of the Day MX Lite for Windows 8 - Word of the Day MX Lite is a Windows 8 app designed to help you learn new words and practice your knowledge.
Shareware Connection periodically updates pricing and software information of 'ZOOM Lite for Windows' from company source 'Bioinformatics Solutions Inc.' , so some information may be slightly out-of-date. You should confirm all information before relying on it. Software piracy is theft, Using 'ZOOM Lite for Windows' crack, password, serial numbers, registration codes, key generators is illegal and prevent future development of ZOOM Lite for Windows.
Plants vs. Zombies 2 - These days there are lot of tower defense games on offer. Coming from the stable of Electronics Arts, which is one of the leading companies in the gaming arena, Plant vs. Zombies is a decent game particularly if you are interested in garden ...
Skitch - Skitch is a user friendly and lightweight image capturing app for OS X that has been in the scene for quite some time. After its purchase by Evernote, the nifty Mac screen-capture tool has undergone some changes. You can still perform tasks with ...
Any Video Converter Free for Mac - Apple does have some stellar media applications for users of Mac OS but at times, you may feel the need for using third party apps too. Its FCP is regarded as an industry leading and powerful video editor but average Mac users may not need such a ...
SeaTools for Windows - Among all the hardware components used in a desktop or laptop, the hard disk is a prime one. In the hard disk is not in good shape, even a PC with powerful CPU and lots of RAM will malfunction or run sluggishly. Hard disk failure can lead to data ...
Canva - While designing becomes a requirement for millions of PC users at times, a majority of them do not feel comfortable about using mainstream design software. The steep learning curve associated with some graphic design and print publishing apps ...
DriveHQ Online Backup Enterprise Edition - For individual users as well as organizations, taking backup of data is vital nowadays. You really cannot count on the PC hard drive solely to store your data forever in a secure manner, as it is! Backup software is a prerequisite and choosing ...
PC DeCrapifier - There is hardly any computer user who does not want to keep the PC running at top speed. However, unnecessary software and bloatware can reduce the speed and performance of your PC. Such Apps often come pre installed with laptops and desktops. ...
MiniTool Partition Wizard Home Edition - It is true that you need a powerful CPU and adequate amounts of RAM to keep your computer running smoothly. However, it is also necessary to ensure that the hard disk remains in top condition. Hard disk needs to be properly optimized and ...
Internet Explorer 10 - Up to the late 1990s, the web browser used by the bulk of Windows users was invariably Internet Explorer while Netscape played the second fiddle. The scene was relatively identical post 2000 but emergence of Firefox and later Google Chrome ...
Impulse Media Player - To play back media files including media and video content, you need to use suitable software. For a majority of Windows users, the integrated WMP is the default choice. However, you can also pick from so many third party music and media playback ...

