Software Listing: Genetics
- EggLib
- License: Freeware
- Price: 0.00

EggLib is built as C++/Python library and program package that can aid you with evolutionary genetics and genomics.
EggLib is a flexible Python module with a performant underlying C++ library (which can be used independently), and allows fast and intuitive development of Python programs and scripts.
A number of pre-programmed applications of EggLib possibilities are available interactively.
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- Publisher: Stephane De Mita
- Date:
- Platform: WinOther
- GenSim
- License: Freeware
- Price: 0.00

GenSim is a lightweight and easy to use application designed to provide with a genetics simulation tool.
GenSim is based on the expression of genes in chicken, enabling you to add multiple animals with different characteristics and mate them to view the result.
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- Publisher: Andrew Vitkus
- Date:
- Platform: WinOther
- simuPOP
- License: Freeware
- Price: 0.00

simuPOP is specially built to be a general-purpose individual-based forward-time population genetics simulation environment.
Built on Python, the simuPOP application provides a large number of objects and functions created in order to manipulate populations and a mechanism to evolve populations forward in time.
Using this R / Splus-like environment, users can create, manipulate and evolve populations interactively, or write a script and run it as a batch file. Owing to its flexible and extensible design, simuPOP can simulate large and complex evolutionary processes with ease.
- Publisher: Bo Peng
- Date:
- Platform: Win2000, Windows 7, WinOther, WinVista
- PGDSpider
- License: Shareware

PGDSpider was built using the Java programming language as a conversion app for population genetics and genomics programs.
The software facilitates the data exchange possibilities between programs for a vast range of data types (e.g. DNA, RNA, NGS, microsatellite, SNP, RFLP, AFLP, multi-allelic data, allele frequency or genetic distances).
Besides the conventional population genetics formats, PGDSpider integrates population genomics data formats commonly used to store and handle next-generation sequencing (NGS) data.
Currently, PGDSpider is not meant to convert very large NGS files as it loads into memory the whole input file, whose size may exceed available RAM.
- Publisher: Heidi Lischer, Laurent Excoffier
- Date:
- Platform: WinOther
- Genetics 4 Medics
- License: Freeware
- Price: 0.00

*** Genetics 4 Medics featured in The Lancet (Sep, 2011)
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*** Compiled by doctors from Clinical Genetics, Pediatrics & Cardiology backgrounds
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Medical Genetics is one of the fastest developing branches in Medicine. Genetic conditions are encountered in almost all Medical specialities.
Genetics 4 Medics application is intended to facilitate the learning process as well as to refresh the knowledge which has already been acquired. We hope this will be useful to students and practicing clinicians alike.
*** NOTE: In the free version, the user will have access to 50 Genetic conditions, 50 Clues, 3 Chromosomes in the mapping section and the questions in the Gene Teaser section.
- Publisher: Apps4Medics Limited
- Date:
- Size: 4710 KB
- Platform: Android, WinMobile
- PediaGene: AAP Genetics Guide
- License: Freeware
- Price: 0.00

PediaGene is a one-stop resource for a wealth of genetic screening information, available in either patient encounter or reference context.
Edited by Robert A. Saul, MD, FAAP, based on the AAP manual Medical Genetics in Primary Care, PediaGene is free to AAP Members through July 1, 2014, thanks to the support of Friends of Children.
Patient Care:
• Track patients, including images
• Record family history and see areas of concern
• See screening questions using SCREEN and FGENES for family history and anomalies
• Red flag alerts for When to Refer
• Link to American College of Medical Genetics’ ACT sheets to understand newborn screening anomalies
Quick Reference:
• Key tables from the manual, including genetic conditions by ethnicity
• Image gallery of genetic anomalies
• Key resources for...
- Publisher: American Academy of Pediatrics Apps
- Date: 16-08-2014
- Size: 40960 KB
- Platform: Android 3.x, Android 4.4, Android 4.x
- BioMolecula 3D ScreenSaver
- License: Shareware
- Price: 9.90

This screensaver shows real 3D models of biological molecules in dynamics. Your screen will look like screens of computers in science fiction films! You may choose one molecule from six available, rotation axis and speed.Six molecules are available in the current version: four prototypes of DNA (Deoxyribonucleic Acid - storage of genetics information) and two proteins - Hemoglobine I Monomeric (Oxygen transport protein) and Cytochrome C 550..
- Publisher: TERMINAL Studio
- Date: 12-02-2002
- Size: 422 KB
- Platform: WinOther
- Bifido Punnett Square Calculator Pro
- License: Shareware
- Price: 195.00

This is the most powerful and fast genetic calculator. With this program you can easily generate punnett squares for very difficult genetics crosses and simulate ratio and probability for offspring in real genetics experiments. Because of the special algorithm, you get absolutely correct results less than one second. You can use more than one letter to designate the alleles in the parental genotypes and use "+" sign for the dominant alleles. With this program calculation of punnett squares will no longer be for you the hard work. The program has many rich features. This professional tool give you a great opportunities for solving not only simple mendelian crosess, but genetics problems for linkage, polygenic inheritance and polyploidy.
- Publisher: Bifidosoft
- Date: 25-11-2012
- Size: 6349 KB
- Platform: WinOther
- ASSIMILATOR
- License: Freeware
- Price: 0.00

Assimilator is a molecular genetics tool to inform selection of associated genetic variants for functional studies.
- Publisher: assimilatoruom.sourceforge.net
- Date: 20-07-2012
- Size: 266 KB
- Platform: WinOther
- Bioinformatics Learning Tutorial
- License: Freeware
- Price: 0.00

Interactive tutorials for undergrad genetics students illustrating DNA replication, transcription, and translation. Original color graphics and animations. *Source requires Qt libraries* Windows version @: http://www.cs.transy.edu/nsmith/BLT_Windows.zip.
- Publisher: cs.transy.edu
- Date: 27-05-2012
- Size: 1072 KB
- Platform: WinOther
- demos_2011
- License: Freeware
- Price: 0.00

The aim of project is to create simplified society simulator including virtual peaople relationships, genetics, needs, behavior etc..
- Publisher: imaginacja.org
- Date: 09-06-2012
- Size: 5 KB
- Platform: Linux, Mac OS X, WinOther
- Geneusim
- License: Freeware
- Price: 0.00

A small simulator for Mendelian genetics, genetic drift, natural selection and random mutations, built on matplotlib and wxpython. A graph will be generated that traces the distribution of genotypes at successive generations..
- Publisher: geneusim.sourceforge.net
- Date: 23-07-2012
- Size: 17 KB
- Platform: WinOther
- GenLab
- License: Freeware
- Price: 0.00

GenLab abbreviation of Genetics Laboratory .It is a user-friendly bioinformatics tool to support your bioinformatics lab work. GenLab creates a software user-friendly environment, which makes users to make a large number of protein, DNA, and RNA sequence analysis and excellent graphical viewing. It also provides powerful environment for simulations of Protein 3D molecular models. GenLab typically provides: 'User-friendly graphical tools used for finding and working with relevant regions of DNA, RNA, and protein sequences. 'Full integration of data input, data management, calculation results. This eliminates time spent on manual data transfers between different programs and databases.
- Publisher: genlab.sourceforge.net
- Date: 17-05-2012
- Size: 16691 KB
- Platform: WinOther
- GENTimetable
- License: Freeware
- Price: 0.00

This project is using genetics algorithms to complete scheduling tasks such as timetables for elementary / high schools etc. Currently NetBeans project with no GUI and simple HTML export..
- Publisher: gentimetable.sourceforge.net
- Date: 26-07-2012
- Size: 59 KB
- Platform: WinOther
- GeXpert
- License: Freeware
- Price: 0.00

GeXpert is an expert system that can be used for genetics and metabolic pathway analysis. GeXpert can help Biotechnologists do their work faster, reducing the time required for performing, analyzing and storing the results of Bioinformatics research..
- Publisher: gexpert.sourceforge.net
- Date: 09-06-2012
- Size: 42589 KB
- Platform: Linux, Unix, WinOther
- Live gene manipulation system (LiveGMS)
- License: Freeware
- Price: 0.00

LiveGMS is a PHP/MySQL driven gene editor for the game Creatures 3 / Docking Station. It provides a platform independent online editor with most features other binary genetics editors have..
- Publisher: livegms.de.vu
- Date: 18-06-2012
- Size: 1877 KB
- Platform: Linux, Mac OS X, WinOther
- nullhap
- License: Freeware
- Price: 0.00

Application to estimate haplotypes and other genetics data, based on maximum likehood approach. It can handle present-absent as well as multiallelic loci..
- Publisher: nullhap.sourceforge.net
- Date: 23-05-2012
- Size: 58 KB
- Platform: WinOther
- popbam
- License: Freeware
- Price: 0.00

POPBAM is a tool to perform evolutionary or population-based analyses of next-generation sequencing data. POPBAM takes a BAM file as its input and can compute many widely used evolutionary genetics measures in sliding windows across a genome..
- Publisher: popbam.sourceforge.net
- Date: 18-08-2012
- Size: 23 KB
- Platform: Linux
- Sage Bionetworks
- License: Freeware
- Price: 0.00

Opensource software projects for genetics and genomics from Sage Bionetworks..
- Publisher: sagebionetworks.sourceforge.net
- Date: 25-08-2012
- Size: 1625 KB
- Platform: Linux, Unix, WinOther
- PID Tuning Using Genetic Algorithm
- License: Freeware
- Price: 0.00

PID controller has been extensively used in the industrial world. But in this controller it is difficult to tune the PID gains. We apply the genetic algorithm(GA) to tune the PID gains. The GA is agorithm using the biotic; gene the biotic; genetics..
- Publisher: Amin Koohi(Sohrevardi)
- Date: 20-05-2013
- Size: 102 KB
- Platform: Matlab, Scripts















