Software Listing: Biological

BiNA - Biological Network Analyzer is an easy-to-use workbench specially designed to help you visualize biological networks (regulatory, interaction, and metabolic).

This tool can easilly be used as a front-end for BN++ databases, but also as stand-alone tool.

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  • Platform: WinOther

JBioWH provides a framework for biological data integration and management which contains a relational schema for biological data integration, a java Application Programming Interface (API) and a powerful Desktop tool. This framework is designed to provide

1. Data warehouse capabilities to integrate and normalize non heterogeneous biological data
2. An extensive desktop tool for a scientist with no programming experience including an advanced SQL editor for scientist with this programming skill, and,
3. A java API to handle the integrated biological data for further development of Bioinformatics tools.

  • Publisher: jBiowh
  • Date:
  • Size: 12800 KB
  • Platform: Windows 7, Windows 8, WinOther, WinVista

This screensaver shows real 3D models of biological molecules in dynamics. Your screen will look like screens of computers in science fiction films! You may choose one molecule from six available, rotation axis and speed.Six molecules are available in the current version: four prototypes of DNA (Deoxyribonucleic Acid - storage of genetics information) and two proteins - Hemoglobine I Monomeric (Oxygen transport protein) and Cytochrome C 550..

  • Platform: WinOther

BioChem 1stRespondER (tm) is designed to help healthcare professionals deal with chemical and biological warfare attacks. First aid and hospital ER care information on 55 germ and chemical agents (some are not available in the trial version) First drug and dosage recommendations, both for paramedics at the attack site and for emergency department personnel at the hosptial Recommendations on useful lab tests to run Cautions to protect rescuers and caregivers as they do their jobs Recommendations on disaster planning and how to react to a nuclear plant attack or "dirty bomb" explosion.

  • Publisher: Arkansoft
  • Date: 25-03-2005
  • Size: 234 KB
  • Platform: Palm OS

BioChem 1stRespondER (tm) is designed to help healthcare professionals deal with chemical and biological warfare attacks. 20 new agents added in version 2.0. First aid and hospital ER care information on 55 germ and chemical agents (some are not available in the trial version) First drug and dosage recommendations, both for paramedics at the attack site and for emergency department personnel at the hosptial Recommendations on useful lab tests to run Cautions to protect rescuers and caregivers as they do their jobs Recommendations on disaster planning and how to react to a nuclear plant attack or "dirty bomb" explosion.

  • Publisher: Arkansoft
  • Date: 25-03-2005
  • Size: 746 KB
  • Platform: Pocket PC

BioChem 1stRespondER (tm) is designed to help healthcare professionals deal with chemical and biological warfare attacks. 20 new agents added in version 2.0. First aid and hospital ER care information on 55 germ and chemical agents (some are not available in the trial version) First drug and dosage recommendations, both for paramedics at the attack site and for emergency department personnel at the hosptial Recommendations on useful lab tests to run Cautions to protect rescuers and caregivers as they do their jobs Recommendations on disaster planning and how to react to a nuclear plant attack or "dirty bomb" explosion.

  • Publisher: Arkansoft
  • Date: 25-03-2005
  • Size: 1001 KB
  • Platform: Linux, Mac OS X, OS/2, Unix, Win2000, Windows Server, WinOther

BioChem 1stRespondER (tm) is designed to help healthcare professionals deal with chemical and biological warfare attacks. 20 new agents added in version 2.0. First aid and hospital ER care information on 55 germ and chemical agents (some are not available in the trial version) First drug and dosage recommendations, both for paramedics at the attack site and for emergency department personnel at the hosptial Recommendations on useful lab tests to run Cautions to protect rescuers and caregivers as they do their jobs Recommendations on disaster planning and how to react to a nuclear plant attack or "dirty bomb" explosion.

  • Publisher: Arkansoft
  • Date: 25-03-2005
  • Size: 763 KB
  • Platform: Mac OS X

Myosotic SignaPoint 2007 provides the ideal environment to analyze biological signals individually or in a group. The key features of SignaPoint 2007 are: · Easy to learn and extremely easy to use. · Analyze multiple bio-signals at once. · More than 20 signal analysis functions. · Export results to other applications. Myosotic SignaPoint 2007 is designed for professionals in the areas of biological signals analysis, electromyography, academia, athletic medicine, and ergonomics . Myosotic SignaPoint 2007 provides the ideal environment to analyze biological signals individually or in a group.

  • Platform: Win2000, WinOther

A tool for modelling biological systems through boolean networks. Can represent and execute biological models..

  • Platform: WinOther

TinkerCell is a Computer-Aided Design (CAD) tool for synthetic biology. Since synthetic biology is a rapidly evolving field, here are the issues which were taken into consideration when designing TinkerCell: -modeling techniques in biology are still at a developmental stage -experimental techniques are constantly evolving, especially automation and directed evolution methods -databases of biological components are still maturing In summary, TinkerCell is designed with the anticipation that the future of synthetic biology will be an intricate interplay between a variety of experimental techniques, databases that store results from experiments, and mathematical models explaining different aspects of the experiments.

  • Platform: WinOther

Biopython is a set of freely available tools for biological computation written in Python by an international team of developers. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. The source code is made available under the Biopython License, which is extremely liberal and compatible with almost every license in the world. We work along with the Open Bioinformatics Foundation, who generously host our website, bug tracker, and mailing lists. This wiki will help you download and install Biopython, and start using the libraries and tools.

  • Platform: WinOther

Biopython is a set of freely available tools for biological computation written in Python by an international team of developers. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. The source code is made available under the Biopython License, which is extremely liberal and compatible with almost every license in the world. We work along with the Open Bioinformatics Foundation, who generously host our website, bug tracker, and mailing lists. This wiki will help you download and install Biopython, and start using the libraries and tools.

  • Platform: WinOther

Biological Annotation Tool is a general-purpose high speed environment for manipulating biological sequence annotations in multiple input and output formats. A plugin-style API permits much extensibility..

  • Platform: Linux, Mac OS X, Unix

Workbench for visualizing biological networks (regulatory, interaction, and metabolic). Can be used as a front-end for BNDB datawarehouses, but also as stand-alone tool..

  • Platform: Linux, Mac OS X, WinOther

BioPAX - A Data Exchange Format for Biological Pathway Information.

  • Platform: Linux, Mac OS X, WinOther
  • Neurocal
  • License: Freeware
  • Price: 0.00
  • Rating

Simulation describing the electrophysiological behavior of a biological neuron (nerve cell). Two sets of membrane kinetics are included: Hodgkin-Huxley and Schwarz for unmyelinated and myelinated axons..

  • Platform: Matlab, Scripts

Large set of functions for biological records (ECG, EEG, phono), datastore, datamining and analysis (HRV, QT, RR, ST). The application is written in Java, so that it is assumed to work on all devices. It runs as a desktop or client-server application. It
BiSiDat - biological signals database License - Apache License V2.0.

  • Platform: Linux, Mac OS X, WinOther

BioCM is Biological Content Manager: a Zope/Plone/Biopython product to manage, share and publish biological annotations on the web.
Biological Content Management License - GNU General Public License (GPL).

  • Platform: WinOther

A collection of corpus and access routines for developing biological literature analysis systems.
Biological Corpus Collection License - GNU General Public License version 2.0 (GPLv2).

  • Platform: WinOther

A biological data warehouse that locally stores and integrates biological sequences, molecular interactions, homology information, functional annotations of genes, and biological ontologies.Website:http://bioinformatics.ubc.ca/atlas
Atlas Biological Database License - GNU General Public License (GPL).

  • Platform: WinOther

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