srst
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Multi-locus sequence typing (MLST) has become the gold standard for population analyses of many important bacterial pathogens. Advances in sequencing technology have made it increasingly feasible to perform population-level analyses of bacteria at the whole genome level, suggesting that MLST may eventually be replaced by whole-genome sequencing. SRST is a tool to quickly and accurately retrieve MLST information from short read sets, using inputs easily downloadable from public MLST databases. SRST output is directly compatible with existing data formats and analysis tools, allowing quick and easy comparison between novel whole-genome data and MLST data.
Free download from Shareware Connection - Multi-locus sequence typing (MLST) has become the gold standard for population analyses of many important bacterial pathogens.
Version: 1.0 | Platform: WinOther
Released Date: | Rating: 0 | Title: srst
Author Url: http://sourceforge.net/projects/srst
Program Info Url: http://sourceforge.net/projects/srst
Download Url: http://sourceforge.net/projects/srst
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