rnapairing
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Given an RNA chain, this library explores all its (non-crossed) pairing possibilities. It builts a radix tree containinng the partial solutions for every substring. Thus, following the principles of dynamic programming, it only solves each substring once.
The string AUAUCAAAGGGA, for instance, would accept the pairings "...((...)..)", "...((....).)", "...((.....))", ".(...)......", etc.
See the comments in pairing.h for more details.
rnapairing License - GNU General Public License version 3.0 (GPLv3)
Free download from Shareware Connection - Given an RNA chain, this library explores all its (non-crossed) pairing possibilities.
Version: 1.0 | Platform: WinOther
Released Date: | Rating: 0 | Title: rnapairing
Author Url: http://sourceforge.net/projects/rnapairing
Program Info Url: http://sourceforge.net/projects/rnapairing
Download Url: http://sourceforge.net/projects/rnapairing
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