Home > By category > Education >Science > primeScaff



primeScaff

  • Downloads: 
  • Views: 
  • Rating:

primeScaff is intended to automate the sometimes tedious process of manually designing specific primer pairs around gaps of genomic scaffolds and speedup the genome finishing stage of a genome sequencing project. It incorporates de-novo repeat finding using RECON to avoid as much as possible designing primers in repetitive regions and offers the possibility to easily fine-tune the primer design options using primer3. It outputs the repeat, gap and primer annotations in gff2 and gff3 to easily load and visualize the results using tools like UGENE (recommended) or artemis.

primeScaff License - GNU General Public License version 3.0 (GPLv3)

Free download from Shareware Connection - primeScaff is intended to automate the sometimes tedious process of manually designing specific primer pairs around gaps of genomic scaffolds and speedup the genome finishing stage of a genome sequencing project.

Publisher: Primescaff | License: Freeware | Price: 0.00
Version: 1.5 | Size: 4964 KB | Platform: Linux, Mac OS X
Released Date: | Rating: 0 | Title: primeScaff

Author Url: http://sourceforge.net/projects/primescaff
Program Info Url: http://sourceforge.net/projects/primescaff
Download Url: http://sourceforge.net/projects/primescaff/files/latest/download?source=directory
Screenshot Url: http://sourceforge.net/projects/primescaff/screenshots/Screenshot%20from%202012-08-26%2020:59:38.png

primeScaff related downloads:

Shareware Connection periodically updates pricing and software information of 'primeScaff' from company source 'Primescaff' , so some information may be slightly out-of-date. You should confirm all information before relying on it. Software piracy is theft,  Using 'primeScaff' crack, password, serial numbers, registration codes, key generators is illegal and prevent future development of primeScaff.

New Reviews

Norton Identity Safe - Symantec has been one of the most popular and major players in computer security solution for years. Its cutting edge system security products usually come with data security features. However, with its Identity Safe, the company has given users ...

Spotflux - Browsing the internet is a common activity among PC users nowadays and it is required for work and personal purposes almost on a daily basis. However, with malware invasion on rise and hackers on prowl, web browsing and download safety has become ...

SiSoftware Sandra Lite - People use computers for various needs, including work, entertainment and information seeking. However, a majority of PC users do not bother much about intricate details of their PC’s hardware parts. A section of users are particular about ...

DriveHQ Online Backup Enterprise Edition - For individual users as well as organizations, taking backup of data is vital nowadays. You really cannot count on the PC hard drive solely to store your data forever in a secure manner, as it is! Backup software is a prerequisite and choosing ...

Xion Audio Player - People use computers for various reasons including official work and entertainment. However, it is quite natural for a workaholic to play music files to alleviate boredom at times. If you have no penchant for the WMP bundled with your copy of ...

Argente Utilities - You can find so many third party utilities that can be used to maintain a Windows based PC and extract maximum performance from it. While these tools offer better performance than Windows in-built utilities, the plethora of choices can make ...

ChrisPC Free Video Converter - Even a few years back, video conversion was not commonplace among average PC users. However, with tremendous progress made in computer software and hardware things have changed. Now, it is quite common to see your neighborhood college student ...

Machete Video Editor Lite 3.8 build - Average PC users are no longer strangers to video file handling and editing. There are so many sources from where you acquire video files, as it is. You also need to deal with video clips acquired from cameras and smart phones. At times, you may ...

SumatraPDF - The PDF format is used worldwide to distribute document files without changing formatting, alignment and layout. It can also be used to share complex engineering designs and diagrams along with massive amounts of text. The biggest benefit of this ...

Nero Kwik Media - Nero is known mostly for its legendary disc burning software that has metamorphosed into a media editing powerhouse over a decade. The multimedia suite offered by the company caters to needs of intermediate and advanced users well but its price ...




New Downloads

Net Control 2

Net Control 2 is a classroom
management and remote control
software for educational
environment. Specially
designed for ...

CMZ2 Worksheet Generator
for Math

CMZ2 Magic Worksheet Generator
for Mathematics for Windows
has a powerful Wizard to help
you Create your own custom ...

MCTH - McCabe Thiele Plates
Calculator

MCTH Number of Theoretical
Plates by McCabe-Thiele method
for distillation tower -
Interactive changes using ...

Russian Word Learning
Software

The Russian Word Teaching
Program gives you the
opportunity to learn Russian
in your half-active time while
doing your ...

DJ Music Mixer

Full-featured DJ and beat
mixing system which lets you
groove to your own style of DJ
music. Professional
independent ...

Christmas Memories

Author of application -Grigor
Asoyan
(http://www.mlab.am)Christmas
is all around!Christmas
Memories is a fun memory ...

Jigsaw Puzzle: Animals

An amazing puzzle game for
children! Now with the new
high-def graphics! Even the
toddlers will be able to enjoy
our new ...

Across The Airwaves Antenna

This is the most convenient
and reliable way to access
Across The Airwaves . You're
always connected to the latest
...

Wallbuilders Live!

This is the most convenient
and reliable way to access
WallBuilders Live!. You're
always connected to the latest
episode. ...

Laws DB of CHINA

Laws Database of China, In
English.Include 340 Law
Codes.You read these law codes
without internet.You also can
use ...

Office Academy

**Updated content feed for a
better experience**Office
Academy is exactly that...this
is where you get your
proficiency ...

Palmary Weather Premium

Weather application with
intuitive user interface will
minimize amount of actions you
need, to get necessary
information ...