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Listing of Science in Education

  • bioGraph
  • License: Freeware
  • Price: 0.00
  • Rating

bioGraph is a set of PHP scripts which can be used in enzyme assays. Currently, this includes pH, Temperature, Michaelis-Menten and Lineweaver-Burke plots..

  • Platform: Linux, Mac OS X, WinOther
  • BioGRID
  • License: Freeware
  • Price: 0.00
  • Rating

Biological General Repository for Interaction Datasets (BioGRID) is a curated biological database of protein-protein interactions. It strives to provide a comprehensive resource of Protein-Protein interactions for all major species.
BioGRID License - GNU General Public License (GPL).

  • Platform: WinOther

This is a grid-based software developed by Java, which transparently enable most of regular bioinformatics programs to perform parallel computing. No re-compiling of target program is required.
biogridjava License - BSD License; GNU Library or Lesser General Public License (LGPL).

  • Platform: WinOther

This will provide a framework for inter-related bioinformatics data, editing and analysis software, where the nodes are the data repositories (ZODB) and the connections are analysis/editing software. Nodes and connections can be added via plugins..

  • Platform: WinOther

The original Bioinformatics Template Library (BTL) uses templates to implement generic programming in same way as the Standard Template Library (STL). Biolib aims at continue developing this library.
Bioinformatics Template Library License - GNU General Public License (GPL).

  • Publisher: Biolib
  • Date: 02-07-2013
  • Platform: WinOther

The ideal Operation System, BioInfoServOS, which is a specially customised system for scientists handling and analysing biological data, but also for easy use of daily official business handing, has been distributed. Download it from www.bioinfoserv.org
BioInfoServ Project License - Academic Free License (AFL); GNU General Public License (GPL); Open Software License 3.

  • Platform: WinOther

An Ajax based Functional Genomics Application Server to aid in functional analysis of entire genome in-silico.
Bioinfotracker License - GNU General Public License (GPL).

  • Platform: WinOther

This is a small project providing simple yet useful scripts for miscellaneous bioinformatics tasks. Powered by the BioInfX team of the Department of Genetics and Molecular Biology of the Center for Research and Advanced Studies of the National Polytechnic Institute of Mexico.

  • Platform: WinOther
  • Bioleiro
  • License: Freeware
  • Price: 0.00
  • Rating

Bioleiro is a Bioloid-based quadruped robot controlled by a PC.
Bioleiro License - Public Domain.

  • Platform: WinOther
  • Biolet
  • License: Freeware
  • Price: 0.00
  • Rating

Biolet is project aimed to analyze genomic DNA sequences using wavelets. Of additional interest may be a batch processing tool for doing round-robin scheduling of jobs on a beowulf cluster. For that checkout the project robin from the CVS..

  • Platform: Linux, WinOther

This project aims to develop a parser for Finnish. The parser and the system of grammatical competence assumed herein, are based on the minimalist theory of grammar (Chomsky 1995, 2005) and Bare Lexicon Hypothesis (Brattico, in prep)..

  • Platform: Linux, Mac OS X, WinOther
  • BioLit
  • License: Freeware
  • Price: 0.00
  • Rating

BioLit infers and delivers metadata describing the semantic content of all open access, peer-reviewed research articles from the major life sciences literature archive, PubMed Central.
BioLit License - GNU General Public License (GPL).

  • Platform: WinOther

Biologic Institute's Stylus simulation software suite. (See the SVN repository for source code.)
Biologic Stylus License - Apache License V2.0.

  • Platform: WinOther

Biological Annotation Tool is a general-purpose high speed environment for manipulating biological sequence annotations in multiple input and output formats. A plugin-style API permits much extensibility..

  • Platform: Linux, Mac OS X, Unix

BioCM is Biological Content Manager: a Zope/Plone/Biopython product to manage, share and publish biological annotations on the web.
Biological Content Management License - GNU General Public License (GPL).

  • Publisher: Biocm
  • Date: 17-09-2013
  • Platform: WinOther

A collection of corpus and access routines for developing biological literature analysis systems.
Biological Corpus Collection License - GNU General Public License version 2.0 (GPLv2).

  • Platform: WinOther

This is a collection of softwares that I have been using in my research on protein interaction network. By release them under the GPL 2.0 lience, I hope that they can be useful to others, as well.
Biological Network Analysis License - GNU General Public License (GPL).

  • Publisher: Bnl
  • Date: 05-09-2013
  • Platform: WinOther

Workbench for visualizing biological networks (regulatory, interaction, and metabolic). Can be used as a front-end for BNDB datawarehouses, but also as stand-alone tool..

  • Platform: Linux, Mac OS X, WinOther

A tool to construct the metabolic networks from KEGG, and compare the constructed metabolic networks. Phylogenetic trees can be constructed along the case..

  • Platform: Linux, Mac OS X, WinOther

BioPAX - A Data Exchange Format for Biological Pathway Information.

  • Platform: Linux, Mac OS X, WinOther

BIRBU (BIological Relationship BUilder) is a Java tool for microarray gene expression data analysis. BIRBU identifies biologically significant relationship between genes using microarray data and prior knowledge on relationships between genes.
Biological Relationship Builder License - GNU General Public License (GPL).

  • Publisher: Birbu
  • Date: 31-10-2013
  • Platform: WinOther

Bioloid API is a C# class library made to easily controle a Bioloid Robot directly from a computer. It allows to connect to a CM-5 controller and send comands to every dynamixels through high level commands.
Bioloid API License - GNU General Public License (GPL).

  • Platform: WinOther

This program compilation offers complete control of a Bioloid robot including a 3d visualisation, xml-based robot modelling, a custom scripting language, the capture of robot movement, a custom firmware, different interpolation types and much more!.

  • Platform: Linux, WinOther
  • BioMa
  • License: Freeware
  • Price: 0.00
  • Rating

BioMa is a specimen based Biodiversity database Manager. It is designed to store, organize, and manipulate biodiversity-related scientific data, either for the purposes of museums, scientific collections, or research projects..

  • Platform: Linux, Mac OS X, WinOther

A GIS GRASS extension to assess the exploitability of forest biomass residues take in to account different (ground and cable) harvesting techniques..

  • Platform: WinOther
  • Biome
  • License: Freeware
  • Price: 0.00
  • Rating

Biome is a C++ library for the development of (individual-based) simulations..

  • Platform: Linux, Unix

Investigacion de diseño avanzado en biomecanica computacional con elementos finitos usando herramientas de software-libre..

  • Platform: WinOther

Computer programs for application in Sports science, Physical Culture, among others. By Enrique R.P. Buendi­a Lozada. buendiaenr@yahoo.com.mx , Benemérita Universidad AutAlnoma de Puebla, México. (Software without any warranty)..

  • Platform: WinOther
  • BiomeNet
  • License: Freeware
  • Price: 0.00
  • Rating

Using metagenomics data to infer community-level metabolic divergence is hindered by the lack of a suitable statistical framework. BiomeNet (Bayesian inference of metabolic Networks) is a novel hierarchical Bayesian model that models a sample as a unique mixture of complex metabolic systems (metabosystems).

  • Publisher: Biomenet
  • Date: 03-06-2013
  • Size: 9 KB
  • Platform: WinOther

A library for iris-detection written in pure C# and .NET 3.5.
BiometriXLib License - Academic Free License (AFL).

  • Platform: WinOther

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