Generalized Pattern Matching
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This tool is designed to solve generalized pattern matching problem, by which we only find a set of sub-patterns, ignoring the gaps in between the sub-patterns. This tool is extremely fast and also has good tolerance to errors.
pattern matching in human genome in less than one minute , hard-disk based k-mers index , complementary dual-seeding , pruned DP in extending , short seed length k has good tolerance of errors , both positive and negative gaps can be handled
Generalized Pattern Matching License - Academic Free License (AFL)
Free download from Shareware Connection - This tool is designed to solve generalized pattern matching problem, by which we only find a set of sub-patterns, ignoring the gaps in between the sub-patterns.
Version: 1.0 | Platform: WinOther
Released Date: | Rating: 0 | Title: Generalized Pattern Matching
Author Url: http://gpatternmatch.sourceforge.net
Program Info Url: http://gpatternmatch.sourceforge.net
Download Url: http://gpatternmatch.sourceforge.net
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