Gemi
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Gemi is fast, automated and user-friendly tool to design polymerase chain reaction (PCR) primers. Gemi accepts multiple aligned and long sequences with degenerated nucleotides. It can be used for quantitative/real-time PCR, conventional and Sanger sequencing. Gemi accepts DNA and RNA sequences with degenerate nucleotide (non-A/C/G/T bases).
The package contains Gemi programs and user guide file. It is developed by C#.NET 2005 and requires dot NET framework 2.0, which is freely available. The programs are as the following:
1. The first program is to design PCR primers from multiple sequence alignment.
2. Program to convert ClustalW format (.aln), Phylip (.phy) and (.gde) formats to Fasta format.
3. Reverse and/or complement program is to find the reverse and complement counterpart of single or multiple sequences.
Please cite to Sobhy, H, Colson, P; Gemi: PCR Primers Prediction from Multiple Alignments, Comparative and Functional Genomics 2012; doi:10.1155/2012/783138.
Gemi License - GNU General Public License version 3.0 (GPLv3)
Free download from Shareware Connection - Gemi is fast, automated and user-friendly tool to design polymerase chain reaction (PCR) primers.
Version: 2.0 | Size: 443 KB | Platform: Linux, Mac OS X, Unix, WinOther
Released Date: | Rating: 0 | Title: Gemi
Author Url: https://sourceforge.net/projects/neferu/
Program Info Url: https://sourceforge.net/projects/neferu/
Download Url: http://sourceforge.net/projects/gemi/files/latest/download?source=directory
Screenshot Url: http://sourceforge.net/projects/gemi/screenshots/Gemi%20screen%20shot.png
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