FCgene: genotype format converter
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FCgene is a free, open-source Format Converting tool for genotyped SNP data. FCgene can read and convert genotyped SNP data having format of the software: PLINK, SNPTEST and the genotype imputation tools MACH, IMPUTE, BEAGLE and BIMBAM. FCgene is designed for:
- for converting plink formatted genotyped data into the format of any one of previously mentioned imputation programs,
-obtaining templates of imputation commands which are necessary for the selected imputation tool,
-converting back the imputed genotype data into the plink format after the completion of imputation process,
-changing the input data of any any imputation tool into any other imputation software,
- and preparing files for SNPTEST software from plink formatted data and from the files generated by previously mentioned imputation tools.
For more information, we recommend you to read its documentation file.
Key words: change, convert genotype format, imputation output, PLINK, IMPUTE SNPTEST MACH
written in c++
Free download from Shareware Connection - FCgene is a free, open-source Format Converting tool for genotyped SNP data.
Version: 1.0.4 | Size: 5720 KB | Platform: Linux, WinOther
Released Date: | Rating: 0 | Title: FCgene: genotype format converter
Author Url: http://www.imise.uni-leipzig.de/en/Groups/GenStat/Tools/index.jsp
Program Info Url: http://www.imise.uni-leipzig.de/en/Groups/GenStat/Tools/index.jsp
Download Url: http://sourceforge.net/projects/fcgene/files/latest/download?source=directory
Screenshot Url: http://sourceforge.net/projects/fcgene/screenshots/Screen_shot.png
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