fastsimcoal
- Downloads:
- Views:
- Rating:

While preserving all the simulation flexibility of simcoal2, fastsimcoal is now implemented under a faster continous-time sequential Markovian coalescent approximation, allowing it to efficiently generate genetic diversity for different types of markers along large genomic regions, for both present or ancient samples. It includes a parameter sampler allowing its integration into Bayesian or likelihood parameter estimation procedure.
fastsimcoal can handle very complex evolutionary scenarios including an arbitrary migration matrix between samples, historical events allowing for population resize, population fusion and fission, admixture events, changes in migration matrix, or changes in population growth rates. The time of sampling can be specified independently for each sample, allowing for serial sampling in the same or in different populations.
Different markers, such as DNA sequences, SNP, STR (microsatellite) or multi-locus allelic data can be generated under a variety of mutation models (e.g. finite- and infinite-site models for DNA sequences, stepwise or generalized stepwise mutation model for STRs data, infinite-allele model for standard multi-allelic data).
fastsimcoal can simulate data in genomic regions with arbitrary recombination rates, thus allowing for recombination hotspots of different intensities at any position. fastsimcoal implements a new approximation to the ancestral recombination graph in the form of sequential Markov coalescent allowing it to very quickly generate genetic diversity for >100 Mb genomic segments.
Free download from Shareware Connection - While preserving all the simulation flexibility of simcoal2
Version: 1.1.1 | Size: 1505 KB | Platform: WinOther
Released Date: | Rating: 0 | Title: fastsimcoal
Author Url: http://cmpg.unibe.ch
Program Info Url: http://cmpg.unibe.ch
Download Url: http://cmpg.unibe.ch/software/fastsimcoal/downloads/fsc_win32.zip
Import Points for AutoCAD
Ez-Architect
ABViewer
My Hatch
DipTrace
Home Plan Pro
DipTrace Free
Import Shapes (ESRI)
JustCad
Raster Manager
Cartoon Maker
ThumbNail Viewer
Capture Perfect
Virtual Fashion Professional
Animation
Audio Encoders & Decoders
Audio File Players
Audio File Recorders
Audio
Authoring Tools
CD & DVD Tools
Composition
Desktop Publishing
Fonts
Graphic Capture
Graphic Viewers
Illustration
Image Editing
Preserving Desktop Icon Location
Download Flexibility
Flexibility Moves
Flexibility Puzzles
Showing Flexibility Moves
Bersoft Sampling Analyzer - This software is intended for simulating and analyzing samplings from experimental data, using both infinite and finite populations; supports basic statistics, frequency and graphics for both the population and simulated samples data.
sr-convert - sr-convert is a command-line sample-rate converter for WAV files, which supports a wide variety of sampling rates, and achieves very high sound quality. It runs on Windows (MinGW) and x86 Linux systems, and makes use of SSE instructions if available.
United States Population Growth Model - Simulink model that predicts US population in 2100 AD: visualization and animation included
BirdTerm Java Serial Port Terminal - A Java-based Serial Port Terminal program like TeraTerm.
Serial Cloner - Serial Cloner is a Molecular Biology software that provides tools with an intuitive interface to assists you in DNA cloning, sequence analysis and visualization.
Shareware Connection periodically updates pricing and software information of 'fastsimcoal' from company source 'Laurent Excoffier' , so some information may be slightly out-of-date. You should confirm all information before relying on it. Software piracy is theft, Using 'fastsimcoal' crack, password, serial numbers, registration codes, key generators is illegal and prevent future development of fastsimcoal.
PictBear - Nowadays, a majority of PC users resort to digital image editing once in a while. It may be required for retouching image captured in smart phones or for creating an album in Facebook. For some people, tinkering with digital images is a pastime ...
SeaMonkey, Portable Edition - Using the Internet has become a necessity for a majority of people, including those who do not use a PC regularly. To browse web, stream video or download online content, people often resort to using various third party apps. For example, using ...
SeaTools for Windows - Among all the hardware components used in a desktop or laptop, the hard disk is a prime one. In the hard disk is not in good shape, even a PC with powerful CPU and lots of RAM will malfunction or run sluggishly. Hard disk failure can lead to data ...
Hekasoft Backup & Restore - There was a time a majority of Windows PC users stuck to Internet Explorer as it was the integrated web browsing app. After arrival and growth of Open Source rivals like Firefox and Chrome, the scenario has changed a lot. PC users are now spoilt ...
MiniTool Partition Wizard Home Edition - It is true that you need a powerful CPU and adequate amounts of RAM to keep your computer running smoothly. However, it is also necessary to ensure that the hard disk remains in top condition. Hard disk needs to be properly optimized and ...
Xion Audio Player - People use computers for various reasons including official work and entertainment. However, it is quite natural for a workaholic to play music files to alleviate boredom at times. If you have no penchant for the WMP bundled with your copy of ...
ArtSage - PC users often need to make use of third party applications for making slideshows. While Windows inbuilt utility for viewing images and running slideshows keeps getting better with time, for many users third party apps seem better option. If you ...
Hanso Player - Using a media player application to play back music files is something nearly every PC user needs to do. There are so many applications that the abundance can leave average users somewhat puzzled. If the bundled WMP does not suit your taste but ...
Nero Kwik Media - Nero is known mostly for its legendary disc burning software that has metamorphosed into a media editing powerhouse over a decade. The multimedia suite offered by the company caters to needs of intermediate and advanced users well but its price ...
UltraMixer Free Edition - Sound Mixing and is a sought after profession and creating your own mix is considered to be pretty cool. With Sound Mixing profession, also known as DJing, comes the need of certain software programs which help hugely while in this profession. ...


