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Listing of Science in Education

Sequencing technologies, such as Illumina sequencing, provide the sequences of
short "reads" of DNA that come from random positions on the genome. These reads
then must be assembled de-novo into the original genome, or, if there is a
reference genome available mapped onto the reference genome.

  • Platform: WinOther
  • hyfi
  • License: Freeware
  • Price: 0.00
  • Rating

Hyfi is software for identifying PCR primer binding sites in genomic sequences. It includes a statistical mechanical model of DNA binding energy, and a suffix array implementation for indexing genomic sequences.
hyfi License - BSD License.

  • Publisher: Hyfi
  • Date: 07-08-2013
  • Platform: WinOther
  • LifoBot
  • License: Freeware
  • Price: 0.00
  • Rating

LifoBot is a simple robot built from scratch using a Gumstix embedded system. It is controlled via bluetooth and is able to move exploiting two engines. This is a didactic project designed for people wanting to learn something new.
LifoBot License - GNU General Public License (GPL).

  • Publisher: Lifobot
  • Date: 07-08-2013
  • Platform: WinOther
  • RepAge
  • License: Freeware
  • Price: 0.00
  • Rating

RepAge is the next generation of computational reputation models based on cognitive theories..

  • Publisher: Repage
  • Date: 07-08-2013
  • Platform: WinOther

m0n0merhunter is a command line program for computing the most frequent delta masses of ultra high mass resolution and accurate mass measurements using mass spectrometer data.
m0n0merhunter License - GNU General Public License (GPL).

  • Platform: WinOther

Chloe - a chatterbot with charisma. Learns from experience, and speaks any language you teach her. Perhaps even useful, but surely entertaining.
Chloe - the digital goddess License - Python Software Foundation License.

  • Publisher: Chloe
  • Date: 07-08-2013
  • Size: 12 KB
  • Platform: Linux, Mac OS X, WinOther

Develop an MS Excel Add-in to open STDF files
Excel STDFv4 License - GNU General Public License (GPL).

  • Platform: WinOther
  • spdc
  • License: Freeware
  • Price: 0.00
  • Rating

This is a simulator for 3D distributed circuit based on GNU Octave. It reads a netlist describing distributed circuit parameters, stimuli, analysis types (op, ac, tran), and output controls (plot, plot3). It can also export distributed circuit to Ngspice netlist and import the corresponding Ngspice simulation result.

  • Publisher: Spdc
  • Date: 07-08-2013
  • Size: 186 KB
  • Platform: Linux, Unix
  • STEAMHP
  • License: Freeware
  • Price: 0.00
  • Rating

Don Nichols wrote a handy program to calculate the approximate horsepower produced by a steam engine. I rewrote his program to make the input more explicit. Don has reviewed the program and given his permission to publish it here..

  • Platform: WinOther

Flex LIMS provides a flexible alternative to manage and track experiments, samples, results, files, and related data for any laboratory screening effort. Its strong API allows for rapid creation of new GUI using choice of programming language and DBMS.

  • Platform: WinOther

Converts files from Garmin(R)'s IMG file format to GMAPI file format.
IMG2GMAPI License - BSD License.

  • Platform: WinOther

A relatively simple parser meant to process configuration files, designed for HEP (High Energy Physics) and Statistical software to attain the flexibility needed for large configuration frames in the context of C++/ROOT framework programming.
High Energy Parser License - GNU General Public License (GPL).

  • Platform: WinOther
  • FuncNet
  • License: Freeware
  • Price: 0.00
  • Rating

Client tools for the FuncNet protein function analysis platform: http://funcnet.eu/
FuncNet License - GNU General Public License (GPL).

  • Platform: WinOther

This program will allow herbavore-like life forms to evolve on a grid. The grid will grow food, and these organisms will evolve to eat the food on the ground, reproduce and compete with other organisms in the same environment.
herbavore evolver License - Apache License V2.

  • Publisher: Herbevo
  • Date: 07-08-2013
  • Platform: WinOther

Blueglass is an open distributed image processing architecture that instead of performing the image-processing task either at the camera or in the monitoringarea using traditional architectures, the algorithms are performed in both locations.
blueglass License - GNU General Public License (GPL).

  • Platform: WinOther
  • qushape
  • License: Freeware
  • Price: 0.00
  • Rating

Aim of this project is to analyze SHAPE data to obtain reactivity of nucleotides.
qushape License - GNU Library or Lesser General Public License (LGPL).

  • Publisher: Qushape
  • Date: 07-08-2013
  • Platform: WinOther

CANviaUSB plugins is a collection of addons to extend the functionality of CANviaUSB. The plugins are written using Qt4. CANviaUSB is a CAN monitor for USB to CAN converter that can be found at http://www.CANviaUSB.com
CANviaUSB Plugins License - GNU Library or Lesser General Public License (LGPL).

  • Platform: WinOther

SNP-o-matic is a fast, stringent short-read mapping software. It supports a multitude of output types and formats, for uses in filtering reads, alignments, sequence-based genotyping calls, assisted reassembly of contigs etc.
SNP-o-matic License - GNU General Public License (GPL).

  • Platform: WinOther

Conway's Game of Life for parallel computers with MPI.
Parallel Conways Game of Life by Ed License - Academic Free License (AFL).

  • Publisher: Edsgol
  • Date: 07-08-2013
  • Platform: WinOther

Integrasoft Grid Fabric (IGF) is an Abstraction Layer to caching engines (i.e. Tangosol, others). Lowers the barrier of entry to Grid 1) provide common programming patterns (e.g. lists, maps, collectables, native types) 2) Variable Data Granularity
Integrasoft Grid Fabric (IGF) License - GNU General Public License (GPL).

  • Platform: WinOther
  • HyPhy
  • License: Freeware
  • Price: 0.00
  • Rating

HyPhy is a comprehensive environment for maximum likelihood statistical analysis of genetic sequence data. It includes a large collection of out of the box analyses, a feature-rich graphical user interface for custom data analysis and a scripting languag
HyPhy License - GNU General Public License (GPL).

  • Publisher: Hyphy
  • Date: 07-08-2013
  • Platform: WinOther
  • webDEMS
  • License: Freeware
  • Price: 0.00
  • Rating

webDEMS is "open-source, web-based software" for Diabetes Electornic Management System.
webDEMS License - GNU General Public License (GPL).

  • Publisher: Webdems
  • Date: 07-08-2013
  • Platform: WinOther
  • GRMSM
  • License: Freeware
  • Price: 0.00
  • Rating

An integrated atmospheric model for weather and climate prediction and simulation. It includes portable versions of global spectral model, regional spectral model, and non-hydrostatic mesoscale spectral model.
GRMSM License - Public Domain.

  • Publisher: Grmsm
  • Date: 07-08-2013
  • Platform: WinOther

An STL format importer/exporter plugin script for Google SketchUp. Supports both binary and ASCII import and export.
Imports and exports STL files from SketchUp and SketchUp Lite, Handles metric and imperial units, Handles binary or ASCII file formats
STL for Sketchup License - GNU Library or Lesser General Public License (LGPL).

  • Publisher: Stl4su
  • Date: 07-08-2013
  • Platform: WinOther
  • jMiner
  • License: Freeware
  • Price: 0.00
  • Rating

JMiner is a (not yet!) complete data mining and artificial intelligence solution written in Java. Support for neural networks, genetic algorithms/programming, decision trees, clustering, market basket analysis, link analysis, data cleansing, and others.

  • Publisher: Jminer
  • Date: 06-08-2013
  • Platform: WinOther

this is a PHD student's work of facility management research
fmOne - Facility Management System One License - GNU General Public License (GPL).

  • Publisher: Fmone
  • Date: 06-08-2013
  • Platform: WinOther

"T-Station" is software designed to colect , store and managemeasured temperatures from DS1820 sensors in "micro LAN" topology.
Thermal Station ( T Station ) License - GNU General Public License (GPL).

  • Platform: WinOther

DNAtools is a perl CGI based software wich analyzes DNA sequences in order to find out the maximum of information for further bio analysis. It is intended to help people to gain time..

  • Publisher: Cgi-dna
  • Date: 06-08-2013
  • Platform: WinOther

Maximal Clique Motif Reduction (MCMR) is a software program for running and then combining the output of multiple motif finder programs, such as MEME, AlignACE and Weeder, into a set of consensus predictions with associated confidence rankings.
Maximal Clique Motif Reduction License - MIT License.

  • Publisher: Mcmr
  • Date: 06-08-2013
  • Platform: WinOther

Simulation software for a mechanic workshop in C++ using MFC. Developped for Windows OS only. USes an enhanced GUI for showing the simulation and the problems occuring in the workshop.
GestAtelier License - Public Domain.

  • Platform: WinOther

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