Software Listing of Author : "Unipro"
- UGENE for Windows
- License: Shareware
- Price:


UGENE is a free cross-platform genome analysis suite.
Main features:
* Multiple sequence alignment using MUSCLE 3,4 and KAlign;
* HMM profiles build and search, based on the source of HMMER 2 and HMMER 3;
* PCR Primers design using Primer 3;
* Protein secondary structure prediction using GOR IV and PSIPRED;
* Phylogenetic analysis with Phylip;
* Search for restriction enzymes and integration with REBASE;
* Extremely fast repeat finder;
* DNA reference assembly using Bowtie;
* Search for transcription factor binding sites using SITECON;
* Protein back translation;
* ORF finder;
* Complete Smith-Waterman algorithm implementation;
* Comparing genomes using dotplot view.
User Interface:
* Visual and interactive genome...
- Platform: WinOther
- Unipro UGENE
- License: Freeware
- Price: 0.00


Unipro UGENE is a free visual software solution for DNA and protein sequence analysis. UGENE provides customizable tools for visualization, analysis, annotation of genetic sequences. Features: Integrated tools Multiple sequence alignment using MUSCLE 3, KAlign, Clustal; HMM profiles build and search, based on the source of HMMER 2 and HMMER 3; PCR Primers design using Primer 3; Cloning in silico capabilities; Queries to NCBI BLAST and CDD databases; Protein secondary structure prediction using GOR IV and PSIPRED; Phylogenetic analysis with Phylip; Search for restriction enzymes and integration with REBASE; Extremely fast repeat finder; DNA short reads to reference alignment using Bowtie; De novo assembly with CAP3; Search for transcription factor binding sites using SITECON; Protein back translation; ORF finder;...
- Platform: WinOther
- Unipro UGENE 64-bit
- License: Shareware
- Price:


Unipro UGENE 64-bit is a free visual software solution for DNA and protein sequence analysis. UGENE provides customizable tools for visualization, analysis, annotation of genetic sequences.
Features:
Integrated tools
Multiple sequence alignment using MUSCLE 3, KAlign, Clustal;
HMM profiles build and search, based on the source of HMMER 2 and HMMER 3;
PCR Primers design using Primer 3;
Cloning in silico capabilities;
Queries to NCBI BLAST and CDD databases;
Protein secondary structure prediction using GOR IV and PSIPRED;
Phylogenetic analysis with Phylip;
Search for restriction enzymes and integration with REBASE;
Extremely fast repeat finder;
DNA short reads to reference alignment using Bowtie;
De novo assembly with CAP3;
Search for...
- Platform: Win7 x64, Windows 7, WinOther, WinVista, WinVista x64
