Software Listing of Author : "Mail2vignesh1985"

  • miRPI
  • License: Freeware
  • Price: 0.00

MicroRNAs (miRNAs) are newly discovered class of non-coding small RNAs of 20-24 nucleotide length that regulate gene and protein expression in plants and animals. MiRNAs have so far been identified mostly by specific cloning of small RNA molecules, complemented by computational methods. Computational identification of miRNA is faster and generally follows AB initio and sequence alignment methods. Here we developed MIRPI, a new software that finds highly conserved miRNAs from the given gene sequences by using non-repeated miRNAs of the users interest. The software is designed to identify the required miRNA's, their targets and also to calculate the Adjusted Minimum Folding free Energy (AMFE) and Minimum Folding free Energy Index (MFEI) which are one of the most important parameters to confirm the miRNAs. MIRPI is developed by...

  • Platform: WinOther
  • SeqCalc
  • License: Shareware
  • Price:

Rapid genome sequencing enriched biological databases with enormous sequence data. Yet it remains a daunting task to unravel this information. However experimental and computational researchers lead their own way in analyzing sequence information. Here we introduce a standalone portable tool named "SeqCalcd-deDt that would assist the research personnel in computational sequence analysis and automated experimental calculations. Although several tools are available online for sequence analysis they serve only for one or two purposes. SeqCalc is a package of offline program, developed using Perl and TCL/Tk scripts that serve ten different applications. This tool would be an initiative to both experimental and computational researchers in their routine research. SeqCalc is executable in all windows operating systems.

  • Platform: WinOther
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