Software Listing of Author : "Curtis Huttenhower"
- MEFIT
- License: Shareware
- Price:


MEFIT, also known as the Microarray Experiment Functional Integration Technology is developed as a system for microarray integration.
Given any amount of microarray data, it predicts the probability of pairwise functional relationship for any gene pair within individual biological functions.
As a framework, MEFIT uses the results of many microarray experiments in combination with known biological process annotations (drawn from the Gene Ontology, KEGG, MIPS, or a biologist's own pathways of interest) to predict new gene pair functional relationships within the given biological functions.
Or in other words, MEFIT is a system that takes microarray results and known functional annotations as inputs and produces predicted gene pair functional relationships as output.
- Publisher: Curtis Huttenhower
- Date Released:
- Download
- Platform: WinOther
- MEFIT for Windows
- License: Shareware
- Price:


MEFIT! MEFIT is a Microarray Experiment Functional Integration Technology. Given any amount of microarray data, it predicts the probability of pairwise functional relationship for any gene pair within individual biological functions.
As described in Huttenhower et al. 2006, we've evaluated this system using a collection of 40 microarray data sets and 200 biological processes. This web site makes the results of this evaluation available for download and provides an online view of the test set predictions based on hierarchical clustering.
Select a biological function from the menu below to view the results of clustering the S. cerevisiae genome using MEFIT's test set predictions within that function as a similarity metric. Alternatively, enter a gene name or ORF identifier to list only functions in which that gene...
- Publisher: Curtis Huttenhower
- Date Released:
- Download Size: 552 KB
- Download
- Platform: WinOther
